{"id":489,"date":"2015-11-16T11:40:29","date_gmt":"2015-11-16T03:40:29","guid":{"rendered":"https:\/\/lsl.sinica.edu.tw\/Blog\/?p=489"},"modified":"2015-11-16T11:41:23","modified_gmt":"2015-11-16T03:41:23","slug":"heatmap","status":"publish","type":"post","link":"https:\/\/lsl.sinica.edu.tw\/Blog\/2015\/11\/heatmap\/","title":{"rendered":"\u7c21\u6613\u756bHeatmap\u7684\u5de5\u5177"},"content":{"rendered":"<p><a href=\"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-content\/uploads\/2015\/11\/ChatRoom-20151116.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-full wp-image-499\" src=\"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-content\/uploads\/2015\/11\/ChatRoom-20151116.jpg\" alt=\"ChatRoom-20151116\" width=\"848\" height=\"1000\" \/><\/a><\/p>\n<p><!--more--><\/p>\n<h3><\/h3>\n<p>&nbsp;<\/p>\n<h3>\u4ecb\u7d39\u4e00\u500b\u5be6\u7528\u7684\u756bHeatmap\u8edf\u9ad4\uff0c\u5176\u512a\u9ede\u6709\uff1a<\/h3>\n<ol>\n<li>\n<h3>\u514d\u8cbb\u4e0b\u8f09\u4f7f\u7528\u3002<\/h3>\n<\/li>\n<li>\n<h3>\u514d\u5b89\u88dd\uff0c\u4e0b\u8f09\u5b8c\u6210\u89e3\u58d3\u7e2e\u5f8c\uff0c\u5373\u53ef\u76f4\u63a5\u57f7\u884c\u3002<\/h3>\n<\/li>\n<li>\n<h3>\u64cd\u4f5c\u4ecb\u9762\u7c21\u55ae\u3002<\/h3>\n<\/li>\n<li>\n<h3>\u63d0\u4f9b\u57fa\u672c\u7684\u7d71\u8a08\u6aa2\u5b9a(Statistical test)\u53ca\u96c6\u7fa4\u5206\u6790(Cluster Analysis)\u3002<\/h3>\n<\/li>\n<\/ol>\n<p>&nbsp;<\/p>\n<h3>TM4\u9996\u9801\u7db2\u5740\uff1a<a href=\"http:\/\/www.tm4.org\/mev.html\">http:\/\/www.tm4.org\/mev.html<\/a><\/h3>\n<p>&nbsp;<\/p>\n<p><a href=\"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-content\/uploads\/2015\/11\/1.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-full wp-image-490\" src=\"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-content\/uploads\/2015\/11\/1.jpg\" alt=\"1\" width=\"915\" height=\"437\" \/><\/a><\/p>\n<h3>\u9ede\u9078\u7db2\u9801\u53f3\u908aDownload MeV v4.9\u4e26\u89e3\u58d3\u7e2e\uff0c\u63d0\u9192\u60a8\uff0c\u5728\u57f7\u884c\u6b64\u8edf\u9ad4\u4e4b\u524d\uff0c\u8a18\u5f97\u8981\u5148\u5b89\u88ddJava\uff0c\u4e26\u66f4\u65b0\u81f3\u6700\u65b0\u7248\u672c\u3002<\/h3>\n<h3>\u5206\u6790\u6b65\u9a5f\u5982\u4e0b\uff1a<\/h3>\n<h3>1. \u89e3\u58d3\u7e2e\u5b8c\u5f8c\u7684\u8cc7\u6599\u593e\uff0c\u9ede\u64ca\u300cMeV\u300d\uff0c\u57f7\u884c\u7a0b\u5f0f\u3002<\/h3>\n<p><a href=\"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-content\/uploads\/2015\/11\/2.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-full wp-image-491\" src=\"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-content\/uploads\/2015\/11\/2.jpg\" alt=\"2\" width=\"352\" height=\"226\" \/><\/a><\/p>\n<h3>2. File \" Load Data<\/h3>\n<p><a href=\"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-content\/uploads\/2015\/11\/3.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-full wp-image-492\" src=\"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-content\/uploads\/2015\/11\/3.jpg\" alt=\"3\" width=\"158\" height=\"344\" \/><\/a><\/p>\n<h3>3. \u8f38\u5165\u8cc7\u6599\u3002<\/h3>\n<p><a href=\"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-content\/uploads\/2015\/11\/4.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-full wp-image-493\" src=\"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-content\/uploads\/2015\/11\/4.jpg\" alt=\"4\" width=\"1248\" height=\"1058\" \/><\/a><\/p>\n<h3>4. Clustering \" Hierarchical Clustering\uff0c\u6b64\u70ba\u6700\u5e38\u4f7f\u7528\u7684Heatmap\u5206\u6790\u65b9\u6cd5\u3002<\/h3>\n<p><a href=\"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-content\/uploads\/2015\/11\/5.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-full wp-image-494\" src=\"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-content\/uploads\/2015\/11\/5.jpg\" alt=\"5\" width=\"279\" height=\"504\" \/><\/a><\/p>\n<h3>5. \u5206\u6790\u53c3\u6578\u8a2d\u5b9a\u3002<\/h3>\n<p><a href=\"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-content\/uploads\/2015\/11\/6.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-full wp-image-495\" src=\"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-content\/uploads\/2015\/11\/6.jpg\" alt=\"6\" width=\"745\" height=\"837\" \/><\/a><\/p>\n<h3>6. \u5206\u6790\u5b8c\u6210\u5f8c\uff0c\u5728\u8996\u7a97\u5de6\u908a\uff0c\u6703\u591a\u51faHCL(1)\u7684subtree\uff0c\u9ede\u9078HCL Tree\uff0c\u5c31\u53ef\u4ee5\u770b\u5230\u5206\u7fa4\u5f8c\u7684Heatmap\u4e86\u3002<\/h3>\n<h3><a href=\"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-content\/uploads\/2015\/11\/7.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-full wp-image-496\" src=\"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-content\/uploads\/2015\/11\/7.jpg\" alt=\"7\" width=\"587\" height=\"658\" \/><\/a><\/h3>\n<h3>7. \u5728Display\u88e1\u9762\u6709Heatmap\u7684\u683c\u5f0f\u8abf\u6574\uff0c\u53ef\u8a2d\u5b9a\u5b57\u578b\u3001\u984f\u8272\u3001\u984f\u8272\u5c3a\u5ea6\u3001\u683c\u5b50\u5927\u5c0f\u2026\u7b49\uff0c\u8b93\u5716\u5f62\u5448\u73fe\u5f97\u66f4\u6f02\u4eae\u3002<\/h3>\n<p><a href=\"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-content\/uploads\/2015\/11\/8.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-full wp-image-497\" src=\"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-content\/uploads\/2015\/11\/8.jpg\" alt=\"8\" width=\"174\" height=\"249\" \/><\/a><\/p>\n<h3>\u9019\u6a23\u6700\u57fa\u672c\u7684Heatmap\u5373\u5b8c\u6210\u4e86\uff0c\u82e5\u5c0d\u5176\u4ed6\u5206\u6790\u65b9\u6cd5\u6216Cluster\u7684\u53c3\u6578\u8a2d\u5b9a\u6709\u7591\u554f\uff0c\u8acb\u54a8\u8a62\u751f\u7269\u8cc7\u8a0a\u6216\u7d71\u8a08\u7684\u5c08\u696d\u4eba\u54e1\u3002<\/h3>\n<p>&nbsp;<\/p>\n<h3><span style=\"color: #0000ff;\"><strong><span style=\"font-family: Thread-00001b6c-Id-00000080;\"><span style=\"font-family: \u65b0\u7d30\u660e\u9ad4;\">\u4ee5\u4e0a\u5167\u5bb9\u611f\u8b1d\u5206\u751f\u6240\u5f90\u552f\u54f2\u7814\u7a76\u52a9\u6280\u5e2b\u63d0\u4f9b\uff0c\u5e0c\u671b\u5c0d\u60a8\u5011\u6709\u5e6b\u52a9\u3002<\/span><\/span><\/strong><\/span><\/h3>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<div class=\"pld-like-dislike-wrap pld-template-1\">\r\n    <div class=\"pld-like-wrap  pld-common-wrap\">\r\n    <a href=\"javascript:void(0)\" class=\"pld-like-trigger pld-like-dislike-trigger  \" title=\"\u8b9a\" data-post-id=\"489\" data-trigger-type=\"like\" data-restriction=\"ip\" data-already-liked=\"0\">\r\n                        <i class=\"fas fa-thumbs-up\"><\/i>\r\n                <\/a>\r\n    <span class=\"pld-like-count-wrap pld-count-wrap\">0    <\/span>\r\n<\/div><\/div>","protected":false},"excerpt":{"rendered":"<p>0<\/p>\n","protected":false},"author":2,"featured_media":0,"comment_status":"open","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[18],"tags":[16,27],"class_list":["post-489","post","type-post","status-publish","format-standard","hentry","category-bioinformatics","tag-dr-a-cula-lab","tag-heatmap"],"_links":{"self":[{"href":"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-json\/wp\/v2\/posts\/489","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-json\/wp\/v2\/comments?post=489"}],"version-history":[{"count":5,"href":"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-json\/wp\/v2\/posts\/489\/revisions"}],"predecessor-version":[{"id":503,"href":"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-json\/wp\/v2\/posts\/489\/revisions\/503"}],"wp:attachment":[{"href":"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-json\/wp\/v2\/media?parent=489"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-json\/wp\/v2\/categories?post=489"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/lsl.sinica.edu.tw\/Blog\/wp-json\/wp\/v2\/tags?post=489"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}