Research Findings
Inst. of Biomedical Sciences - 李彥莉 Li, Yen Li
Journal 11
- (Li YL), Langley CA, Azumaya CM, Echeverria I, Chesarino NM, Emerman M, Cheng Y, Gross JD*. The structural basis for HIV-1 Vif antagonism of human APOBEC3G. Nature. 615(7953), 728-733, 2023. [JCR] [WOS]
- Gupta M, Azumaya CM, Moritz M, Pourmal S, Diallo A, Merz GE, Jang G, Bouhaddou M, Fossati A, Brilot AF, Diwanji D, Hernandez E, Herrera N, Kratochvil HT, Lam VL, Li F, Li Y, Nguyen HC, Nowotny C, Owens TW, Peters JK, Rizo AN, Schulze-Gahmen U, Smith AM, Young ID, Yu Z, Asarnow D, Billesbolle C, Campbell MG, Chen J, Chen KH, Chio US, Dickinson MS, Doan L, Jin M, Kim K, Li J, (Li YL), Linossi E, Liu Y, Lo M, Lopez J, Lopez KE, Mancino A, Moss FR 3rd, Paul MD, Pawar KI, Pelin A, Pospiech TH Jr, Puchades C, Remesh SG, Safari M, Schaefer K, Sun M, Tabios MC, Thwin AC, Titus EW, Trenker R, Tse E, Tsui TKM, Wang F, Zhang K, Zhang Y, Zhao J, Zhou F, Zhou Y, Zuliani-Alvarez L, Agard DA, Cheng Y, Fraser JS, Jura N, Kortemme T, Manglik A, Southworth DR, Stroud RM, Swaney DL, Krogan NJ*, Frost A*, Rosenberg OS*, Verba KA*. CryoEM and AI reveal a structure of SARS-CoV-2 Nsp2, a multifunctional protein involved in key host processes. bioRxiv : the preprint server for biology. -, -, 2021.
- Bracken Colton J., Lim Shion A., Solomon Paige, Rettko Nicholas J., Nguyen Duy P., Zha Beth Shoshana, Schaefer Kaitlin, Byrnes James R., Zhou Jie, Lui Irene, Liu Jia, Pance Katarina, Azumaya Caleigh M., Braxton Julian R., Brilot Axel F., Gupta Meghna, Li Fei, Lopez Kyle E., Melo Arthur, Merz Gregory E., Moss Frank, Paulino Joana, Pospiech Thomas H., Pourmal Sergei, Puchades Cristina, Rizo Alexandrea N., Smith Amber M., Sun Ming, Thomas Paul V., Wang Feng, Yu Zanlin, Asarnow Daniel, Braxton Julian R., Campbell Melody G., Chio Cynthia M., Chio Un Seng, Dickinson Miles Sasha, Diwanji Devan, Faust Bryan, Gupta Meghna, Hoppe Nick, Jin Mingliang, Li Fei, Li Junrui, Liu Yanxin, Merz Gregory E., Nguyen Henry C., Paulino Joana, Pospiech Thomas H., Pourmal Sergei, Sangwan Smriti, Trenker Raphael, Trinidad Donovan, Tse Eric, Zhang Kaihua, Zhou Fengbo, Azumaya Caleigh M., Billesboelle Christian, Bowen Alisa, Campbell Melody G., Diwanji Devan, Hoppe Nick, (Li Yen-Li), Nguyen Phuong, Nowotny Carlos, Puchades Cristina, Safari Mali, Sangwan Smriti, Schaefer Kaitlin, Smith Amber M., Trenker Raphael, Tsui Tsz Kin Martin, Whitis Natalie, Zhao Jianhua, Asarnow Daniel, Azumaya Caleigh M., Chio Cynthia M., Faust Bryan, Gupta Meghna, Kim Kate, Moritz Michelle, Owens Tristan W., Paulino Joana, Peters Jessica K., Pourmal Sergei, Schaefer Kaitlin, Tsui Tsz Kin Martin, Biel Justin, Deshpande Ishan, Herrera Nadia, Kratochvil Huong T., Liu Xi, Schulze-Gahmen Ursula, Young Iris D., Chen Jen, Diallo Amy, Doan Loan, Flores Sebastian, Gupta Meghna, Jin Mingliang, Kratochvil Huong T., Lam Victor L., Li Yang, Lo Megan, Merz Gregory E., Paulino Joana, Thwin Aye C., Titus Erron W., Yu Zanlin, Zhou Fengbo, Zhang Yang, Bulkley David, Joves Arceli, Joves Almarie, McKay Liam, Tabios Mariano, Tse Eric, Agard David A., Cheng Yifan, Fraser James S., Frost Adam, Jura Natalia, Kortemme Tanja, Krogan Nevan J., Manglik Aashish, Rosenberg Oren S., Southworth Daniel R., Stroud Robert M., Verba Kliment A., Zhou Xin X., Leung Kevin K., Wells James A.*. Bi-paratopic and multivalent VH domains block ACE2 binding and neutralize SARS-CoV-2. Nature Chemical Biology. 17(1), 113-121, 2020-10-20. [JCR] [WOS]
- Schoof M*, Faust B, Saunders RA, Sangwan S, Rezelj V, Hoppe N, Boone M, Billesbolle CB, Puchades C, Azumaya CM, Kratochvil HT, Zimanyi M, Deshpande I, Liang J, Dickinson S, Nguyen HC, Chio CM, Merz GE, Thompson MC, Diwanji D, Schaefer K, Anand AA, Dobzinski N, Zha BS, Simoneau CR, Leon K, White KM, Chio US, Gupta M, Jin M, Li F, Liu Y, Zhang K, Bulkley D, Sun M, Smith AM, Rizo AN, Moss F, Brilot AF, Pourmal S, Trenker R, Pospiech T, Gupta S, Barsi-Rhyne B, Belyy V, Barile-Hill AW, Nock S, Liu Y, Krogan NJ, Ralston CY, Swaney DL, Garcia-Sastre A, Ott M, Vignuzzi M, (QCRG Structural Biology Consortium), Walter P*, Manglik A*. An ultrapotent synthetic nanobody neutralizes SARS-CoV-2 by stabilizing inactive Spike. Science (New York, N.Y.). 370(6523), 1473-1479, 2020. [JCR] [WOS]
- Gordon DE, Hiatt J, Bouhaddou M, Rezelj VV, Ulferts S, Braberg H, Jureka AS, Obernier K, Guo JZ, Batra J, Kaake RM, Weckstein AR, Owens TW, Gupta M, Pourmal S, Titus EW, Cakir M, Soucheray M, McGregor M, Cakir Z, Jang G, O'Meara MJ, Tummino TA, Zhang Z, Foussard H, Rojc A, Zhou Y, Kuchenov D, Huttenhain R, Xu J, Eckhardt M, Swaney DL, Fabius JM, Ummadi M, Tutuncuoglu B, Rathore U, Modak M, Haas P, Haas KM, Naing ZZC, Pulido EH, Shi Y, Barrio-Hernandez I, Memon D, Petsalaki E, Dunham A, Marrero MC, Burke D, Koh C, Vallet T, Silvas JA, Azumaya CM, Billesbolle C, Brilot AF, Campbell MG, Diallo A, Dickinson MS, Diwanji D, Herrera N, Hoppe N, Kratochvil HT, Liu Y, Merz GE, Moritz M, Nguyen HC, Nowotny C, Puchades C, Rizo AN, Schulze-Gahmen U, Smith AM, Sun M, Young ID, Zhao J, Asarnow D, Biel J, Bowen A, Braxton JR, Chen J, Chio CM, Chio US, Deshpande I, Doan L, Faust B, Flores S, Jin M, Kim K, Lam VL, Li F, Li J, (Li YL), Li Y, Liu X, Lo M, Lopez KE, Melo AA, Moss FR 3rd, Nguyen P, Paulino J, Pawar KI, Peters JK, Pospiech TH Jr, Safari M, Sangwan S, Schaefer K, Thomas PV, Thwin AC, Trenker R, Tse E, Tsui TKM, Wang F, Whitis N, Yu Z, Zhang K, Zhang Y, Zhou F, Saltzberg D, Hodder AJ, Shun-Shion AS, Williams DM, White KM, Rosales R, Kehrer T, Miorin L, Moreno E, Patel AH, Rihn S, Khalid MM, Vallejo-Gracia A, Fozouni P, Simoneau CR, Roth TL, Wu D, Karim MA, Ghoussaini M, Dunham I, Berardi F, Weigang S, Chazal M, Park J, Logue J, McGrath M, Weston S, Haupt R, Hastie CJ, Elliott M, Brown F, Burness KA, Reid E, Dorward M, Johnson C, Wilkinson SG, Geyer A, Giesel DM, Baillie C, Raggett S, Leech H, Toth R, Goodman N, Keough KC, Lind AL, Klesh RJ, Hemphill KR, Carlson-Stevermer J, Oki J, Holden K, Maures T, Pollard KS, Sali A, Agard DA, Cheng Y, Fraser JS, Frost A, Jura N, Kortemme T, Manglik A, Southworth DR, Stroud RM, Alessi DR, Davies P, Frieman MB, Ideker T, Abate C, Jouvenet N, Kochs G, Shoichet B, Ott M, Palmarini M, Shokat KM, Garcia-Sastre A*, Rassen JA*, Grosse R*, Rosenberg OS*, Verba KA*, Basler CF*, Vignuzzi M*, Peden AA*, Beltrao P*, Krogan NJ*. Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms. Science (New York, N.Y.). 370(6521), abe9403, 2020. [JCR] [WOS]
- (Li YL), Chandrasekaran V, Carter SD, Woodward CL, Christensen DE, Dryden KA, Pornillos O, Yeager M, Ganser-Pornillos BK*, Jensen GJ*, Sundquist WI*. Primate TRIM5 proteins form hexagonal nets on HIV-1 capsids. eLife. 5, e16269, 2016. [JCR] [WOS]
- Lin C, Chen EH, (Lee LY), Hsu RL, Luh FY, Yang LL, Chou CF, Huang LD, Lin CC, Chen RP*. Comparison of the anti-amyloidogenic effect of O-mannosylation, O-galactosylation, and O-GalNAc glycosylation. Carbohydrate research. 387, 46-53, 2014. [JCR] [WOS]
- Liao TY, (Lee LY), Chen RP*. Leu138 in bovine prion peptide fibrils is involved in seeding discrimination related to codon 129 M/V polymorphism in the prion peptide seeding experiment. The FEBS journal. 278(22), 4351-61, 2011. [JCR] [WOS]
- Hsu RL, Lee KT, Wang JH, (Lee LY), Chen RP*. Amyloid-degrading ability of nattokinase from Bacillus subtilis natto. Journal of agricultural and food chemistry. 57(2), 503-8, 2009. [JCR] [WOS]
- Ho CC, (Lee LY), Huang KT, Lin CC, Ku MY, Yang CC, Chan SI, Hsu RL, Chen RP*. Tuning the conformational properties of the prion peptide. Proteins. 76(1), 213-25, 2009. [JCR] [WOS]
- (Lee LY), Chen RP*. Quantifying the sequence-dependent species barrier between hamster and mouse prions. Journal of the American Chemical Society. 129(6), 1644-52, 2007. [JCR] [WOS]