Training Courses
- Topic 1 ：The Bioinformatics Series
- Topic 2 ：Tools & E-Resources at Life Science Library
- -- Physical Class； -- Video Class
- or
will appeared 21 days before the class date for registration；Click Nextto fill out information to complete registration
【LSL eResources series】Workshop on Advanced Applications of Ingenuity Pathway Analysis (IPA): Multi-omics Integration and Toxicity Mechanism Profiling(In English)(Physical and Video Class)
2025-05-09 （Fri） 09:30~12:00
Ms.Christine Hsiung(Project Assistant Manager, GGA Corp)
2F Computer classroom, Bldg. D, NBRP
【Class Requirements】If you do not have an account yet, please register first.
Course Description
This workshop introduces advanced applications of IPA in multi-omics data integration, biological pathway discovery, and toxicity prediction. Participants will explore case-based examples to identify key regulatory mechanisms using proteomic, phosphoproteomic, and transcriptomic data, and apply tools such as IPA Interpret and machine learning-assisted analysis to construct biologically meaningful insights.
Course outlies
- Overview of IPA and Recent Database Updates
- Introduction to IPA Interpret for Automated Data Explanation
- Application of Multi-Omics Data in IPA
- Pathway and Regulator Network Analysis in Viral Infection (Monkeypox virus)
- Transcriptomics-Based Toxicity Analysis in Pesticide Exposure Models
- Machine Learning Pathway Analysis and Advanced Features
- Upstream Regulator Analysis and Tox Analysis for Predictive Toxicology
- Interpretation of Results and Reporting Strategies
【Bioinformatics series】Local alignments & BLAST online and offline (In English)(Physical and Video Class)
2025-05-13 （Tue） 14:00~16:00
Dr.Wen-Dar Lin
(Associate Research Specialist,
IPMB)
Research Building of Environmental Changes, AS, 6005 Room
(Associate Research Specialist, IPMB)
1. Theoretical string alignment and local alignment algorithm in computer science
2. BLAST -- Basic Local Alignment Search Tools
3. BLAST statistics
4. Description of kinds of BLAST programs
5. Use of online BLAST programs, NCBI and EnsemblPlants
6. Use of standalone BLAST programs, with an example of post processing
【Bioinformatics series】 Integration and Application of Genetic and Clinical Data (In Chinese)(Physical Lectures)
2025-05-15 （Thu） 10:00~12:00
Dr.Tzu-Pin Lu (Inst. Health Data Analytics and Statistics, NTU)
IBC, 103 Auditorium
In recent years, with the rapid development of high-throughput genetic testing methods and internet technology, the accumulation of genetic and clinical data in the healthcare field has been astonishing. Given the vast and complex nature of this data, establishing an efficient analytical framework capable of accurately addressing research hypotheses has become an urgent challenge. As data continues to grow, more researchers are leveraging machine learning techniques and artificial intelligence models for exploratory analysis, with results that can further assist clinical decision-making and real-world interventions. In this talk, we will present several research case studies to illustrate the current state of genetic and clinical data. Through the integration of these datasets, we aim to provide more precise analytical outcomes.
【LSL eResources series】FlowJo Software Training Course (in Chinese)(Physical Class)
2025-05-20 （Tue） 10:00~16:00
Ms. Mandy (Specialist, BD)
B1A Conference Room, IBMS
10:00-12:00 FlowJo Basic
13:30-15:30 Plugins on FlowJo Exchange
【Reminder】
You’ll need your own laptop for hands-on practice. If you don't have an account, please sign up for a free 30-day trial account first.
【LSL eResources series】EndNote Advanced Essentials(In Chinese)(Physical and Video Class)
2025-05-23 （Fri） 14:00~16:00
Lecturer at Shou Ray Information Service Co., Ltd.
209 Seminar Room, IBC
1.Extension of EndNote Core Functionality
2.Modifying Output Styles for Journal Submissions
3.Combining English and Chinese Journal Styles
This course focuses on advanced features of EndNote, extending from the core functionality. It will teach you how to modify Output styles, create Term Lists, adjust and correct formatting according to journal submission standards, and address other common issues encountered during the writing process. This course is suitable for those with prior experience using EndNote or those who have attended the EndNote core course.
【Bioinformatics series】Bulk RNA expression/pathway analysis(In Chinese)(Physical and Video Class)
2025-05-27 （Tue） 14:00~16:00
Ms.Chia-Ni Hsiung(National Tsing Hua University)
Research Building of Environmental Changes, AS, 6005 Room
Bulk RNA sequence from raw counts, included normalization, batch correlation, DEG and GO/GSEA analysis
【Bioinformatics series】BioData Made Easy: Excel + ChatGPT(In Chinese)(Physical Class)
2025-05-28 （Wed） 10:00~12:00
Dr. Chang, Yao-Ming (Associate Research Scientist, IBMS)
B1B Auditorium, IBMS
This is a practical, skill-building workshop aimed at empowering students to perform biological data analysis using MicrosoE Excel in combination with the AI capabilities of ChatGPT. Designed for students and researchers with an interest in life sciences, this session focuses on extracting insights from real-world datasets without the need for advanced programming.
【Reminder】
You’ll need a paid ChatGPT account and your own laptop for hands-on practice.