Training Courses
- Topic 1 ：The Bioinformatics Series
- Topic 2 ：Tools & E-Resources at Life Science Library
- -- Physical Class； -- Video Class
- or
will appeared 21 days before the class date for registration；Click Nextto fill out information to complete registration
【Bioinformatics series】Local alignments & BLAST online and offline(In English)(Physical and Video Class)
2026-05-05 （Tue） 14:00~16:30
Dr.Wen-Dar Lin(Associate Research Specialist,IPMB,AS)
Research Building of Environmental Changes, AS, 6005 Room
1. Theoretical string alignment and local alignment algorithm in computer science
2. BLAST -- Basic Local Alignment Search Tools
3. BLAST statistics
4. Description of kinds of BLAST programs
5. Use of online BLAST programs, NCBI and EnsemblPlants
6. Use of standalone BLAST programs, with an example of post processing
【LSL eResources series】EndNote Advanced Essentials(In Chinese)(Physical and Video Class)
2026-05-14 （Thu） 10:00~12:00
Mr. Max Lin(Shou Ray Information Service Co., Ltd.)
B1A Conference Room, IBMS
1.Extension of EndNote Core Functionality
2.Modifying Output Styles for Journal Submissions
3.Combining English and Chinese Journal Styles
This course focuses on advanced features of EndNote, extending from the core functionality. It will teach you how to modify Output styles, create Term Lists, adjust and correct formatting according to journal submission standards, and address other common issues encountered during the writing process. This course is suitable for those with prior experience using EndNote or those who have attended the EndNote core course.
Requirement: Please bring your laptop for the hands-on session.
【Bioinformatics series】Bulk RNA expression/pathway analysis(In Chinese)(Physical and Video Class)
2026-05-19 （Tue） 14:00~16:00
Ms.Chia-Ni Hsiung(National Tsing Hua University)
Research Building of Environmental Changes, AS, 6005 Room
Course Description
This course introduces the workflow of bulk RNA-seq, including experimental design, quality control (QC), normalization, differential expression analysis (DEG), and pathway analysis. Participants will learn how to interpret transcriptomic data and translate results into biological insights.
Course Outline
1. Fundamentals and Experimental Workflow of Bulk RNA-seq
2. Data Preprocessing and Quality Control (QC)
3. Normalization and Data Exploration
4. Differential Expression Analysis (DEG)
5. Pathway Analysis and Biological Interpretation
【LSL eResources series】IPA Hands-on Workshop: Data Analysis and Pathway Interpretation of Metabolomics and Phosphoproteomics(In Chinese)(Physical Class)
2026-05-20 （Wed） 09:30~12:00
Ms.Christine Hsiung(Senior Deputy Project Manager,GGA Corp)
2F Computer classroom, Bldg. D, NBRP
【Class Requirements】If you do not have an account yet, please register first.
Course Description
This course will provide a brief introduction to QIAGEN Ingenuity Pathway Analysis (IPA) and its recent updates, using a published multi-omics study on adverse cardiac remodeling and metabolic inflexibility as a case example. Participants will be guided through the practical workflow of metabolomics and phosphoproteomics data preparation, upload, analysis, and interpretation. The course will focus on canonical pathways, upstream regulators, networks, Comparison Analysis, Analysis Match, and IPA Interpret, helping participants understand how multi-omics data can be applied to biological mechanism exploration.
Course Outline
Part 1. Introduction to the IPA Platform and Recent Updates
Part 2. Literature Case Study and Research Question
Part 3. Data Preparation and Upload
Part 4. Hands-on Analysis of Phosphoproteomics Data
Part 5. Hands-on Analysis of Metabolomics Data
Part 6. Applications of Comparison Analysis and Analysis Match
Part 7. Introduction to IPA Interpret
Part 8. Multi-omics Integration and Biological Interpretation
Part 9. Discussion and Q&A
JoVE Tea Gathering: Reshaping Bio-Research Training(For Life Sciences Division Only)(In Bilingual)(Physical Lecture)
2026-05-28 （Thu） 14:00~15:00
Ms. Szuchi Huang(JoVE)
B1A Conference Room, IBMS
Object
Bridging the gap in experimental techniques through visualization. This session demonstrates how JoVE transforms complex protocols into visual guides to enhance research reproducibility and training efficiency.
Agenda
02 mins | Opening: Challenges in Biomedical Tech Standardization
03 mins | JoVE Overview: World-leading science video journal (Neuroscience, Immunology, Cancer, etc.)
12 mins | Specialized Applications for IBMS Research:
- Neuroscience: Electrophysiology and animal models.
- Cardiovascular & Metabolism: Protein stability and signaling pathways.
- Infection & Cancer: Vaccine development and DNA repair.
- Smart Data: Multiomics and translational medicine guides.
03 mins | Education & Talent: Supporting TIGP and lab-specific video playlists.
03 mins | Live Demo: Integrating JoVE into Google Classroom/My Class.
07 mins | Q&A: Building a dedicated database for IBMS.
Core Values
Higher Reproducibility: Minimize human error in experiments.
Faster Training: Shorten the learning curve for RAs and students.
Interdisciplinary Learning: Ease the transition into bioinformatics and advanced imaging.
Note: Light refreshments will be provided. All colleagues from the Division of Life Sciences are welcome to attend!