Training Courses
- Topic 1 ：The Bioinformatics Series
- Topic 2 ：Tools & E-Resources at Life Science Library
- -- Physical Class； -- Video Class
- or
will appeared 21 days before the class date for registration；Click Nextto fill out information to complete registration
【Bioinformatics series】Metabolomics data analysis I & II(In Chinese)(Physical and Video Class)
2026-07-07 （Tue） 14:00~17:00
Dr.Yu-Jen Liang(ISS, AS)
Research Building of Environmental Changes, AS, 6005 Room
I: Basic introduction and data processing workflow
II: Advanced analysis, metabolite database, and application cases
【Bioinformatics series】Networks and Pathways analysis(In Chinese)(Physical and Video Class)
2026-07-14 （Tue） 14:00~16:00
Dr.En-Yu Lai(ISS, AS)
Research Building of Environmental Changes, AS, 6005 Room
Using online Pathway Databases: STRING
【Bioinformatics series】Spatial transcriptions I(In Chinese)(Physical and Video Class)
2026-07-28 （Tue） 14:00~16:00
Dr..Chia-Ni Hsiung(National Tsing Hua University)
Research Building of Environmental Changes, AS, 6005 Room
This course introduces spatial RNA-seq analysis, covering preprocessing, quality control, spatial clustering, and differential expression. It integrates pathway analysis to interpret tissue microenvironment and functional changes, enabling biological insights from spatial gene expression data.
1. Fundamentals and Experimental Workflow of Spatial Transcriptomics
2.Data Preprocessing and Quality Control (QC)
3. Normalization and Data Exploration
4. Spatial Differential Expression and Cell Type Annotation
5. Pathway Analysis and Biological Interpretation
【Bioinformatics series】Spatial transcriptions II(In Chinese)(Physical and Video Class)
2026-08-11 （Tue） 14:00~16:00
Dr.Chi-Chih Wu(IPMB,AS)
Research Building of Environmental Changes, AS, 6005 Room
1. Overview of 10x Visium Technology
2. Space Ranger Outputs and File Structure
3. R Packages for Spatial Transcriptomics Analysis
4. Seurat Object Structure
5. Basic Seurat Analysis Workflow
6. Spot Annotation and Downstream Analysis
7. Integration of scRNA-seq and Spatial Transcriptomics
【Bioinformatics series】Gene annotation and orthology assignment for newly-sequenced organisms(In Chinese)(Physical and Video Class)
2026-08-25 （Tue） 14:00~16:00
Dr.Tsai-Ming Lu(Assistant Research Scientist,ICOB,AS)
Research Building of Environmental Changes, AS, 6005 Room
1. Databases (UniProt, Ensembl Metazoa, KEGG)
2. Sequence homology (BLAST, Diamond)
3. Blast2GO, OrthoFinder, and other tools
Guide to Writing Biomedical Research Papers─and sharing of experiences in AI-assisated writing(In Chinese)(Physical Lecture)
2026-09-01 （Tue） 14:00~17:00
Professor Kong Bung Choo(Adjunct Investigator, Dept Medical Research, Taipei Veterans General Hospital)
1F Auditorium, ICOB
Professor Kong Bung Choo is the author of "Awaking the Writer-Self in a Scientist: Converting Experimental Data to a Research Paper".
1：Preparation
1.1. Understanding the research process in writing
1.2. Parallel in writing a research paper and a novel
1.3. When and where to start
1.4. Construction of figures and tables
2：Writing and revising
2.1. Writing and revising the first draft: Rules to observe
2.2. Writing in scientific and professional English
2.3. Structure of a research paper
3：Submission
3.1. Writing a cover letter
3.2. Addressing reviewer’s comments
4：Sharing of experiences in AI-assisted writing
【Bioinformatics series】AI in the Analysis of Biomedical Data(In Chinese)(Physical and Video Class)
2026-09-08 （Tue） 14:00~16:00
Dr.Yi-Ju Lee(ISS, AS)
Research Building of Environmental Changes, AS, 6005 Room
Biomedical Data Analysis with ML and DL: Classification, Prediction, and Ethical Insights
【Bioinformatics series】Alternative-splicing detection by NGS(In English)(Physical and Video Class)
2026-09-22 （Tue） 14:00~16:30
Dr.Wen-Dar Lin(Associate Research Specialist,IPMB,AS)
Research Building of Environmental Changes, AS, 6005 Room
1. definitions of detecting alternative splicing (AS),
2. theories of isoform-based algorithms,
3. theories of count-based algorithms,
4. quick walk-throughs of AS computation programs,
5. short discussions.
【LSL eResources series】Turnitin training course for instructor (in Chinese)(Video Class)
2026-09-23 （Wed） 14:00~15:30
Ms. Weichi Dai (iGroup Taiwan)
208 Seminar Room, IBC
【Class Requirements】If you do not have an account yet, please register first.
The availability of online resources is contributing to a growing global problem of plagiarism across all educational sectors. Turnitin is the world-leading plagiarism prevention system trusted by 15,000 institutions in 140 countries. Available 24-7, it’s web-based and there’s no need to install any software.
It works by comparing submitted work to the world's largest collection of internet, academic, and student paper content. Turnitin is a complete tool for detecting unoriginal work and teaching students academic writing and referencing skills.
Outline
- What is Turnitin?
- Setting Up Your Account
- Resetting Your Password
- Creating a New Class
- Creating an Assignment
- Submitting the Papers
- Viewing the Similarity Report
- Downloading the Similarity Report
- Resources & FAQs
【Bioinformatics series】Single Cell Analysis I(In Chinese)(Physical and Video Class)
2026-10-06 （Tue） 14:00~16:00
Dr.Chen-Hsin Yu(Assistant Research Specialist,IMB,AS)
Research Building of Environmental Changes, AS, 6005 Room
Introduction to 10x single cell RNA-seq Analysis, including data Quality control, Normalization, Integration, Visualization, Clustering, and Marker identification
【LSL eResources series】Turnitin training course for student (In English)(Video Class)
2026-10-07 （Wed） 14:00~15:00
Ms. Weichi Dai (iGroup Taiwan)
208 Seminar Room, IBC
【Class Requirements】If you do not have an account yet, please register first.
The availability of online resources is contributing to a growing global problem of plagiarism across all educational sectors. Turnitin is the world-leading plagiarism prevention system trusted by 15,000 institutions in 140 countries. Available 24-7, it’s web-based and there’s no need to install any software.
It works by comparing submitted work to the world's largest collection of internet, academic, and student paper content. Turnitin is a complete tool for detecting unoriginal work and teaching students academic writing and referencing skills.
Outline
- What is Turnitin?
- Setting Up Your Account
- Submitting Your Paper
- Viewing the Similarity Report
- Downloading the Similarity Report
【Bioinformatics series】Single Cell Analysis II(In Chinese)(Physical and Video Class)
2026-10-20 （Tue） 14:00~16:00
Dr.Chen-Hsin Yu(Assistant Research Specialist,IMB,AS)
Research Building of Environmental Changes, AS, 6005 Room
Introduction to 10x single cell RNA-seq Analysis, including data Quality control, Normalization, Integration, Visualization, Clustering, and Marker identification